Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 SALL4P6-201ENST00000429385 1691 ntBASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 RN7SKP214-201ENST00000364208 315 ntBASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 RNA5SP359-201ENST00000364838 113 ntBASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDH19Q8TAB3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDH19Q8TAB3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms