Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 GHET1-201ENST00000627071 1906 ntBASIC12.33□□□□□ -0.44
BEST4Q8NFU0 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 MIR943-201ENST00000401286 94 ntBASIC12.33□□□□□ -0.44
BEST4Q8NFU0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 MEP1AP4-201ENST00000423244 1087 ntBASIC12.33□□□□□ -0.44
BEST4Q8NFU0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 AC104794.3-201ENST00000566840 1248 ntBASIC12.33□□□□□ -0.44
BEST4Q8NFU0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 AP001002.3-201ENST00000623482 206 ntBASIC12.33□□□□□ -0.44
BEST4Q8NFU0 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 RN7SKP230-201ENST00000365642 335 ntBASIC12.32□□□□□ -0.44
BEST4Q8NFU0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 ACTBP8-201ENST00000403258 1108 ntBASIC12.32□□□□□ -0.44
BEST4Q8NFU0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 DNAJB3-202ENST00000449667 1266 ntBASIC12.32□□□□□ -0.44
BEST4Q8NFU0 AC104596.2-201ENST00000512793 793 ntBASIC12.32□□□□□ -0.44
BEST4Q8NFU0 DOC2GP-202ENST00000514950 1163 ntBASIC12.32□□□□□ -0.44
BEST4Q8NFU0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 AC004466.1-201ENST00000599515 1080 ntBASIC12.32□□□□□ -0.44
BEST4Q8NFU0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BEST4Q8NFU0 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms