Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 RPS2P32-201ENST00000439199 892 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 AC013355.1-201ENST00000562625 723 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 AL359881.2-201ENST00000602973 570 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 AL132994.2-201ENST00000603120 687 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 AL008721.1-201ENST00000609964 604 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 CR392039.2-201ENST00000623182 509 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 LINC01815-202ENST00000641468 1409 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 NCLP1-201ENST00000445357 1963 ntBASIC13.29□□□□□ -0.28
NUP43Q8NFH3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 TSPY25P-201ENST00000429463 745 ntBASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 AC104306.2-201ENST00000451877 341 ntBASIC13.29□□□□□ -0.28
NUP43Q8NFH3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 GOLGA2P8-201ENST00000505201 779 ntBASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 AL157813.1-201ENST00000612996 587 ntBASIC13.29□□□□□ -0.28
NUP43Q8NFH3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NUP43Q8NFH3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NUP43Q8NFH3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms