Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 KRT18P33-201ENST00000398525 1043 ntBASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 AC016582.2-202ENST00000587765 1094 ntBASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 AC015802.1-201ENST00000588104 1449 ntBASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 AC012617.1-204ENST00000586340 2305 ntBASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.32■□□□□ 0.04
KLHDC9Q8NEP7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 GUCY2EP-203ENST00000531117 1918 ntBASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 AP001267.2-201ENST00000532619 2086 ntBASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 RPSAP70-201ENST00000504462 864 ntBASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 RNA5SP420-201ENST00000516997 137 ntBASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 AC020904.3-201ENST00000624199 442 ntBASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 CICP24-201ENST00000605464 2705 ntBASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 KRT8P38-201ENST00000441370 1430 ntBASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.31■□□□□ 0.04
KLHDC9Q8NEP7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 AL773545.2-201ENST00000442149 472 ntBASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 AC103702.1-201ENST00000548801 2630 ntBASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 RN7SL524P-201ENST00000581152 300 ntBASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KLHDC9Q8NEP7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms