Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 AC018529.2-202ENST00000611482 3087 ntBASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 AC136621.1-201ENST00000624017 2304 ntBASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.73□□□□□ -0.53
CCDC168Q8NDH2 MIR193A-201ENST00000384882 88 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 RN7SKP212-201ENST00000410851 328 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 RBM14-205ENST00000443702 732 ntTSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 RN7SL478P-201ENST00000584358 298 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 RPS5-205ENST00000598495 800 ntTSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AL021707.6-201ENST00000609212 491 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AC073869.4-201ENST00000620841 800 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AP005117.1-202ENST00000581724 1908 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AC023024.2-201ENST00000623561 1993 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 KRT8P43-201ENST00000406052 1458 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 RN7SL684P-201ENST00000465665 294 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 RN7SL69P-201ENST00000468423 272 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 RN7SL480P-201ENST00000581481 294 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 MIR5193-201ENST00000584510 109 ntBASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 COG6-212ENST00000630730 186 ntTSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CCDC168Q8NDH2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC168Q8NDH2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC168Q8NDH2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC168Q8NDH2 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC168Q8NDH2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC11.71□□□□□ -0.53
CCDC168Q8NDH2 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC11.71□□□□□ -0.53
CCDC168Q8NDH2 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms