Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM43AQ8N2R8 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 AC098935.1-201ENST00000446057 611 ntBASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 NPM1P43-201ENST00000558669 786 ntBASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 AC242376.1-201ENST00000559033 726 ntBASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 AC009955.4-201ENST00000597192 544 ntBASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 AC103691.2-201ENST00000618824 433 ntBASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 HLA-C-210ENST00000640219 976 ntBASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM43AQ8N2R8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 AP002761.4-201ENST00000565433 3361 ntBASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 AC026316.1-201ENST00000398900 414 ntBASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 AL353637.1-201ENST00000451571 732 ntBASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 RN7SL181P-201ENST00000462921 277 ntBASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 AL136301.1-201ENST00000615830 422 ntBASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM43AQ8N2R8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM43AQ8N2R8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FAM43AQ8N2R8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
FAM43AQ8N2R8 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM43AQ8N2R8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FAM43AQ8N2R8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM43AQ8N2R8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.52■□□□□ 0.4
FAM43AQ8N2R8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM43AQ8N2R8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms