Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 PCDHA6-201ENST00000378126 3267 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 TSPY16P-201ENST00000449843 468 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 SERBP1P5-201ENST00000510079 1181 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 KRT18P8-201ENST00000581937 1246 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 AC004466.1-201ENST00000599515 1080 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 AC010336.1-201ENST00000539278 4739 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 DLX4-206ENST00000611342 1662 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AC064801.2-201ENST00000625052 1303 ntBASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AP001972.5-201ENST00000624624 2338 ntBASIC11.35□□□□□ -0.59
FAM78BQ5VT40 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AL928654.5-201ENST00000624831 2501 ntBASIC11.35□□□□□ -0.59
FAM78BQ5VT40 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AC125807.2-201ENST00000513358 3514 ntBASIC11.35□□□□□ -0.59
FAM78BQ5VT40 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 RN7SKP230-201ENST00000365642 335 ntBASIC11.35□□□□□ -0.59
FAM78BQ5VT40 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 USP17L6P-201ENST00000382470 1197 ntBASIC11.35□□□□□ -0.59
FAM78BQ5VT40 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 DFFBP1-201ENST00000433250 979 ntBASIC11.35□□□□□ -0.59
FAM78BQ5VT40 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 SPTLC1P1-201ENST00000447199 261 ntBASIC11.35□□□□□ -0.59
FAM78BQ5VT40 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.35□□□□□ -0.59
FAM78BQ5VT40 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms