Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 MEP1AP4-201ENST00000423244 1087 ntBASIC15.9■□□□□ 0.14
HS1BP3Q53T59 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 ATP5G2P4-201ENST00000442175 420 ntBASIC15.9■□□□□ 0.14
HS1BP3Q53T59 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 AC022616.1-201ENST00000518688 554 ntBASIC15.9■□□□□ 0.14
HS1BP3Q53T59 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 AC004461.2-201ENST00000629517 803 ntBASIC15.9■□□□□ 0.14
HS1BP3Q53T59 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HS1BP3Q53T59 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
HS1BP3Q53T59 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 AC020917.4-201ENST00000623994 1999 ntBASIC15.89■□□□□ 0.13
HS1BP3Q53T59 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 AL139094.1-201ENST00000405549 1188 ntBASIC15.89■□□□□ 0.13
HS1BP3Q53T59 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 AC010503.4-201ENST00000615487 688 ntBASIC15.89■□□□□ 0.13
HS1BP3Q53T59 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HS1BP3Q53T59 PES1-205ENST00000405677 2708 ntTSL 2 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HS1BP3Q53T59 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms