Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 ABCD1P2-201ENST00000429313 1601 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 AC009474.1-201ENST00000455096 1565 ntBASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 AC140658.4-201ENST00000561990 352 ntBASIC13.67□□□□□ -0.22
RFTN2Q52LD8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 AC133540.1-201ENST00000620845 1019 ntBASIC13.67□□□□□ -0.22
RFTN2Q52LD8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 AL445250.1-201ENST00000641671 2259 ntBASIC13.67□□□□□ -0.22
RFTN2Q52LD8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFTN2Q52LD8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 AL590824.1-201ENST00000403828 1349 ntBASIC13.66□□□□□ -0.22
RFTN2Q52LD8 SHMT1P1-201ENST00000419974 1312 ntBASIC13.66□□□□□ -0.22
RFTN2Q52LD8 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 PCDHA6-201ENST00000378126 3267 ntBASIC13.66□□□□□ -0.22
RFTN2Q52LD8 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 BOLA2P3-201ENST00000404566 256 ntBASIC13.66□□□□□ -0.22
RFTN2Q52LD8 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 KRT18P36-201ENST00000411618 1276 ntBASIC13.66□□□□□ -0.22
RFTN2Q52LD8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 AC079178.1-201ENST00000420915 656 ntBASIC13.66□□□□□ -0.22
RFTN2Q52LD8 AL354877.1-201ENST00000424412 413 ntBASIC13.66□□□□□ -0.22
RFTN2Q52LD8 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.66□□□□□ -0.22
RFTN2Q52LD8 AC106886.1-201ENST00000568660 600 ntBASIC13.66□□□□□ -0.22
RFTN2Q52LD8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms