Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 RN7SL147P-201ENST00000487345 298 ntBASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 AL359219.1-201ENST00000556311 934 ntBASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM71Q2Q1W2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 TUBB8P4-201ENST00000511806 1324 ntBASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 DKKL1P1-201ENST00000400550 698 ntBASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 AC027139.1-201ENST00000565286 951 ntBASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 ESR1-214ENST00000638569 132 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM71Q2Q1W2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM71Q2Q1W2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM71Q2Q1W2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRIM71Q2Q1W2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM71Q2Q1W2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM71Q2Q1W2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms