Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC126755.5-201ENST00000622756 267 ntBASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 AC073869.1-201ENST00000415574 2762 ntBASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AC111170.3-201ENST00000624282 2464 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 MIR566-201ENST00000385187 94 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AL359219.1-201ENST00000556311 934 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 BAP1-211ENST00000615113 489 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AC026336.4-201ENST00000624565 1050 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 FAM90A21P-201ENST00000510875 1396 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 FAM90A15P-201ENST00000514465 1395 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 FAM90A6P-201ENST00000515148 1394 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 FAM90A16P-201ENST00000526662 1395 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 FAM90A9P-201ENST00000527940 1395 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 FAM90A5P-201ENST00000528738 1395 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 FAM90A14P-201ENST00000530386 1395 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 FAM90A13P-201ENST00000534703 1395 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 AC068587.6-202ENST00000641839 5619 ntBASIC16.34■□□□□ 0.21
SHROOM1Q2M3G4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM1Q2M3G4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM1Q2M3G4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM1Q2M3G4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM1Q2M3G4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM1Q2M3G4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM1Q2M3G4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 COX20P1-201ENST00000366529 357 ntBASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 AC005722.1-201ENST00000431878 964 ntBASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 AC106047.2-201ENST00000511723 743 ntBASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 AP005264.6-204ENST00000588436 719 ntBASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 AL136982.5-201ENST00000605222 294 ntBASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 AC006483.2-201ENST00000609813 515 ntBASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 AC008620.2-201ENST00000510294 1569 ntBASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms