Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 NDUFV2P1-201ENST00000596415 907 ntBASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 MIR6787-201ENST00000616675 61 ntBASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL4Q0D2K0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ISCA2P1-201ENST00000425548 448 ntBASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 DUX4L50-201ENST00000455245 715 ntBASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 AC091544.8-201ENST00000619490 361 ntBASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ST20-AS1-201ENST00000560255 4223 ntBASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL4Q0D2K0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 358 ms