Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP1Q04837 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP1Q04837 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP1Q04837 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP1Q04837 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.02□□□□□ -0.49
SSBP1Q04837 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.02□□□□□ -0.49
SSBP1Q04837 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.02□□□□□ -0.49
SSBP1Q04837 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP1Q04837 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP1Q04837 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 AC104794.3-201ENST00000566840 1248 ntBASIC12.02□□□□□ -0.49
SSBP1Q04837 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP1Q04837 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 AC133539.2-201ENST00000604757 467 ntBASIC12.02□□□□□ -0.49
SSBP1Q04837 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 CCT8L1P-201ENST00000465400 1674 ntBASIC12.02□□□□□ -0.49
SSBP1Q04837 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 Z98885.3-201ENST00000624882 1757 ntBASIC12.02□□□□□ -0.49
SSBP1Q04837 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP1Q04837 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP1Q04837 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP1Q04837 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 AC005014.1-201ENST00000432006 2976 ntBASIC12.01□□□□□ -0.49
SSBP1Q04837 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 AL021155.1-201ENST00000438808 2637 ntBASIC12.01□□□□□ -0.49
SSBP1Q04837 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.01□□□□□ -0.49
SSBP1Q04837 ST13P19-201ENST00000442505 1124 ntBASIC12.01□□□□□ -0.49
SSBP1Q04837 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.01□□□□□ -0.49
SSBP1Q04837 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.01□□□□□ -0.49
SSBP1Q04837 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.01□□□□□ -0.49
SSBP1Q04837 AC092552.1-201ENST00000547243 906 ntBASIC12.01□□□□□ -0.49
SSBP1Q04837 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP1Q04837 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.01□□□□□ -0.49
SSBP1Q04837 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SSBP1Q04837 AC027612.4-201ENST00000605371 583 ntBASIC12.01□□□□□ -0.49
SSBP1Q04837 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP1Q04837 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SSBP1Q04837 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.01□□□□□ -0.49
SSBP1Q04837 AC090386.2-201ENST00000623010 1039 ntBASIC12.01□□□□□ -0.49
SSBP1Q04837 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP1Q04837 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.01□□□□□ -0.49
SSBP1Q04837 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP1Q04837 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SSBP1Q04837 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SSBP1Q04837 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP1Q04837 AC022144.1-201ENST00000602255 1580 ntBASIC12.01□□□□□ -0.49
SSBP1Q04837 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12□□□□□ -0.49
SSBP1Q04837 AOC4P-203ENST00000566825 2289 ntBASIC12□□□□□ -0.49
SSBP1Q04837 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms