Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN20P56880 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CLDN20P56880 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.08□□□□□ -0.32
CLDN20P56880 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN20P56880 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 AC005077.2-201ENST00000449786 690 ntBASIC13.08□□□□□ -0.32
CLDN20P56880 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 AC125604.1-201ENST00000496255 707 ntBASIC13.08□□□□□ -0.32
CLDN20P56880 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 AL139099.5-201ENST00000635274 300 ntBASIC13.08□□□□□ -0.32
CLDN20P56880 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLDN20P56880 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN20P56880 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
CLDN20P56880 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CLDN20P56880 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN20P56880 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN20P56880 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 KRT18P36-201ENST00000411618 1276 ntBASIC13.07□□□□□ -0.32
CLDN20P56880 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 AC078875.1-201ENST00000431907 724 ntBASIC13.07□□□□□ -0.32
CLDN20P56880 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 RCC2P8-201ENST00000502779 1035 ntBASIC13.07□□□□□ -0.32
CLDN20P56880 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CLDN20P56880 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 AC092299.1-201ENST00000632679 757 ntBASIC13.07□□□□□ -0.32
CLDN20P56880 AL805961.1-203ENST00000641078 1258 ntBASIC13.07□□□□□ -0.32
CLDN20P56880 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 AC018629.1-201ENST00000623381 1736 ntBASIC13.07□□□□□ -0.32
CLDN20P56880 AL133338.1-201ENST00000565695 1517 ntBASIC13.07□□□□□ -0.32
CLDN20P56880 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms