Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SUMO3P55854 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
SUMO3P55854 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SUMO3P55854 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 AC098934.1-203ENST00000442868 1262 ntBASIC12.8□□□□□ -0.36
SUMO3P55854 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.8□□□□□ -0.36
SUMO3P55854 NUP210P1-202ENST00000504322 710 ntBASIC12.8□□□□□ -0.36
SUMO3P55854 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.8□□□□□ -0.36
SUMO3P55854 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 AC026803.1-201ENST00000569130 274 ntBASIC12.8□□□□□ -0.36
SUMO3P55854 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 AC091812.3-201ENST00000621362 345 ntBASIC12.8□□□□□ -0.36
SUMO3P55854 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 AC008620.2-201ENST00000510294 1569 ntBASIC12.8□□□□□ -0.36
SUMO3P55854 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SUMO3P55854 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SUMO3P55854 AC072061.1-201ENST00000569710 2234 ntBASIC12.8□□□□□ -0.36
SUMO3P55854 SALL4P6-201ENST00000429385 1691 ntBASIC12.8□□□□□ -0.36
SUMO3P55854 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SUMO3P55854 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SUMO3P55854 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SUMO3P55854 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SUMO3P55854 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 KRT8P43-201ENST00000406052 1458 ntBASIC12.79□□□□□ -0.36
SUMO3P55854 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.79□□□□□ -0.36
SUMO3P55854 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SUMO3P55854 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.79□□□□□ -0.36
SUMO3P55854 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.79□□□□□ -0.36
SUMO3P55854 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.79□□□□□ -0.36
SUMO3P55854 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SUMO3P55854 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SUMO3P55854 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SUMO3P55854 AC009474.1-201ENST00000455096 1565 ntBASIC12.79□□□□□ -0.36
SUMO3P55854 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms