Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP003398.1-201ENST00000531124 318 ntBASIC13.79□□□□□ -0.2
PDX1P52945 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.79□□□□□ -0.2
PDX1P52945 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
PDX1P52945 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
PDX1P52945 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.79□□□□□ -0.2
PDX1P52945 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PDX1P52945 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.79□□□□□ -0.2
PDX1P52945 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PDX1P52945 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PDX1P52945 LINC01815-202ENST00000641468 1409 ntBASIC13.79□□□□□ -0.2
PDX1P52945 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PDX1P52945 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PDX1P52945 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.79□□□□□ -0.2
PDX1P52945 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 GRK6P1-201ENST00000400595 1711 ntBASIC13.78□□□□□ -0.2
PDX1P52945 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
PDX1P52945 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.78□□□□□ -0.2
PDX1P52945 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PDX1P52945 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.78□□□□□ -0.2
PDX1P52945 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PDX1P52945 AC004837.1-201ENST00000446267 564 ntBASIC13.78□□□□□ -0.2
PDX1P52945 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.78□□□□□ -0.2
PDX1P52945 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.78□□□□□ -0.2
PDX1P52945 RPL18AP8-201ENST00000486071 528 ntBASIC13.78□□□□□ -0.2
PDX1P52945 AC026410.1-201ENST00000507366 1101 ntBASIC13.78□□□□□ -0.2
PDX1P52945 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PDX1P52945 AC138701.2-201ENST00000553634 226 ntBASIC13.78□□□□□ -0.2
PDX1P52945 AC141586.1-203ENST00000567242 366 ntBASIC13.78□□□□□ -0.2
PDX1P52945 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.78□□□□□ -0.2
PDX1P52945 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.78□□□□□ -0.2
PDX1P52945 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PDX1P52945 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 BRD7P5-201ENST00000299197 1822 ntBASIC13.78□□□□□ -0.2
PDX1P52945 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.78□□□□□ -0.2
PDX1P52945 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.78□□□□□ -0.2
PDX1P52945 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDX1P52945 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PDX1P52945 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PDX1P52945 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDX1P52945 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PDX1P52945 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDX1P52945 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDX1P52945 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDX1P52945 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PDX1P52945 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PDX1P52945 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDX1P52945 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PDX1P52945 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
PDX1P52945 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 AC092638.2-201ENST00000441105 947 ntBASIC13.77□□□□□ -0.21
PDX1P52945 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 AL157792.1-201ENST00000488281 530 ntBASIC13.77□□□□□ -0.21
PDX1P52945 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PDX1P52945 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.77□□□□□ -0.21
PDX1P52945 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms