Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC20.51■□□□□ 0.87
KDM5CP41229 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC20.51■□□□□ 0.87
KDM5CP41229 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC20.51■□□□□ 0.87
KDM5CP41229 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KDM5CP41229 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC20.5■□□□□ 0.87
KDM5CP41229 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 FMO6P-201ENST00000236166 1620 ntBASIC20.5■□□□□ 0.87
KDM5CP41229 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM5CP41229 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC20.5■□□□□ 0.87
KDM5CP41229 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KDM5CP41229 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
KDM5CP41229 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC20.5■□□□□ 0.87
KDM5CP41229 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM5CP41229 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 MIR1226-201ENST00000408658 75 ntBASIC20.5■□□□□ 0.87
KDM5CP41229 SNORA47-201ENST00000458862 138 ntBASIC20.5■□□□□ 0.87
KDM5CP41229 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM5CP41229 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC20.5■□□□□ 0.87
KDM5CP41229 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
KDM5CP41229 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC20.5■□□□□ 0.87
KDM5CP41229 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC20.5■□□□□ 0.87
KDM5CP41229 ABCD1P3-201ENST00000562927 605 ntBASIC20.5■□□□□ 0.87
KDM5CP41229 BOLA3P2-201ENST00000586496 323 ntBASIC20.5■□□□□ 0.87
KDM5CP41229 OR3A1-202ENST00000615105 966 ntBASIC20.5■□□□□ 0.87
KDM5CP41229 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KDM5CP41229 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM5CP41229 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM5CP41229 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM5CP41229 AC012617.1-204ENST00000586340 2305 ntBASIC20.5■□□□□ 0.87
KDM5CP41229 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KDM5CP41229 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM5CP41229 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC20.49■□□□□ 0.87
KDM5CP41229 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
KDM5CP41229 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 SNORD88B-201ENST00000408454 91 ntBASIC20.49■□□□□ 0.87
KDM5CP41229 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC20.49■□□□□ 0.87
KDM5CP41229 AC093106.1-201ENST00000437271 352 ntBASIC20.49■□□□□ 0.87
KDM5CP41229 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC20.49■□□□□ 0.87
KDM5CP41229 ALDOAP1-201ENST00000491506 1078 ntBASIC20.49■□□□□ 0.87
KDM5CP41229 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC20.49■□□□□ 0.87
KDM5CP41229 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC20.49■□□□□ 0.87
KDM5CP41229 TPST2P1-201ENST00000564073 1102 ntBASIC20.49■□□□□ 0.87
KDM5CP41229 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC20.49■□□□□ 0.87
KDM5CP41229 RN7SL162P-201ENST00000579233 292 ntBASIC20.49■□□□□ 0.87
KDM5CP41229 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC20.49■□□□□ 0.87
KDM5CP41229 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KDM5CP41229 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.49■□□□□ 0.87
KDM5CP41229 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KDM5CP41229 SFPQP1-201ENST00000446621 1786 ntBASIC20.49■□□□□ 0.87
KDM5CP41229 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
KDM5CP41229 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC20.48■□□□□ 0.87
KDM5CP41229 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
KDM5CP41229 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KDM5CP41229 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM5CP41229 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM5CP41229 AC114812.4-201ENST00000506676 757 ntBASIC20.48■□□□□ 0.87
KDM5CP41229 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM5CP41229 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC20.48■□□□□ 0.87
KDM5CP41229 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM5CP41229 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC20.48■□□□□ 0.87
KDM5CP41229 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM5CP41229 PCTP-206ENST00000573500 919 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM5CP41229 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM5CP41229 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
KDM5CP41229 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC20.48■□□□□ 0.87
KDM5CP41229 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms