Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
KRT2P35908 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
KRT2P35908 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 CYP46A4P-201ENST00000414953 267 ntBASIC16.24■□□□□ 0.19
KRT2P35908 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT2P35908 ISCA2P1-201ENST00000425548 448 ntBASIC16.24■□□□□ 0.19
KRT2P35908 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 HIST2H2BC-201ENST00000498492 580 ntBASIC16.24■□□□□ 0.19
KRT2P35908 AC116345.2-201ENST00000512837 523 ntBASIC16.24■□□□□ 0.19
KRT2P35908 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT2P35908 RN7SL774P-201ENST00000577467 290 ntBASIC16.24■□□□□ 0.19
KRT2P35908 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.24■□□□□ 0.19
KRT2P35908 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KRT2P35908 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT2P35908 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 AC104581.4-201ENST00000623126 3052 ntBASIC16.24■□□□□ 0.19
KRT2P35908 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT2P35908 NCLP1-201ENST00000445357 1963 ntBASIC16.24■□□□□ 0.19
KRT2P35908 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KRT2P35908 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT2P35908 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT2P35908 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
KRT2P35908 AC067931.2-201ENST00000623655 2003 ntBASIC16.23■□□□□ 0.19
KRT2P35908 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT2P35908 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
KRT2P35908 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 SPTLC1P5-201ENST00000450718 252 ntBASIC16.23■□□□□ 0.19
KRT2P35908 ALG1L13P-202ENST00000519320 584 ntBASIC16.23■□□□□ 0.19
KRT2P35908 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 MIR4525-201ENST00000580000 75 ntBASIC16.23■□□□□ 0.19
KRT2P35908 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT2P35908 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.23■□□□□ 0.19
KRT2P35908 MIR6799-201ENST00000620297 69 ntBASIC16.23■□□□□ 0.19
KRT2P35908 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.23■□□□□ 0.19
KRT2P35908 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.23■□□□□ 0.19
KRT2P35908 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
KRT2P35908 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
KRT2P35908 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
KRT2P35908 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT2P35908 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT2P35908 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
KRT2P35908 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
KRT2P35908 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT2P35908 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KRT2P35908 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
KRT2P35908 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms