Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.46□□□□□ -0.1
PTPN3P26045 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PTPN3P26045 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PTPN3P26045 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.46□□□□□ -0.1
PTPN3P26045 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PTPN3P26045 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.46□□□□□ -0.1
PTPN3P26045 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.45□□□□□ -0.1
PTPN3P26045 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PTPN3P26045 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.45□□□□□ -0.1
PTPN3P26045 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 RN7SL530P-201ENST00000485097 298 ntBASIC14.45□□□□□ -0.1
PTPN3P26045 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.45□□□□□ -0.1
PTPN3P26045 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.45□□□□□ -0.1
PTPN3P26045 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.45□□□□□ -0.1
PTPN3P26045 AL645939.5-201ENST00000606834 243 ntBASIC14.45□□□□□ -0.1
PTPN3P26045 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.45□□□□□ -0.1
PTPN3P26045 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.45□□□□□ -0.1
PTPN3P26045 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN3P26045 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN3P26045 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PTPN3P26045 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 AGAP12P-201ENST00000585227 2359 ntBASIC14.44□□□□□ -0.1
PTPN3P26045 FAM86MP-201ENST00000340703 885 ntBASIC14.44□□□□□ -0.1
PTPN3P26045 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN3P26045 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
PTPN3P26045 OR8T1P-201ENST00000421347 918 ntBASIC14.44□□□□□ -0.1
PTPN3P26045 AC016700.1-201ENST00000429424 312 ntBASIC14.44□□□□□ -0.1
PTPN3P26045 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN3P26045 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 CHCHD2P2-201ENST00000503744 321 ntBASIC14.44□□□□□ -0.1
PTPN3P26045 AC138649.2-201ENST00000615886 705 ntBASIC14.44□□□□□ -0.1
PTPN3P26045 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PTPN3P26045 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN3P26045 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN3P26045 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PTPN3P26045 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN3P26045 AC135782.3-201ENST00000562782 2105 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms