Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL1P22362 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 AC126335.2-201ENST00000623362 4637 ntBASIC12.19□□□□□ -0.46
CCL1P22362 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.19□□□□□ -0.46
CCL1P22362 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.19□□□□□ -0.46
CCL1P22362 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.19□□□□□ -0.46
CCL1P22362 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL1P22362 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.19□□□□□ -0.46
CCL1P22362 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 AP005482.1-201ENST00000563722 1273 ntBASIC12.19□□□□□ -0.46
CCL1P22362 AC093752.3-201ENST00000567343 901 ntBASIC12.19□□□□□ -0.46
CCL1P22362 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 AC015967.2-201ENST00000624092 234 ntBASIC12.19□□□□□ -0.46
CCL1P22362 AC006435.4-201ENST00000625037 234 ntBASIC12.19□□□□□ -0.46
CCL1P22362 AL356737.1-201ENST00000634391 234 ntBASIC12.19□□□□□ -0.46
CCL1P22362 AL139424.3-202ENST00000641619 917 ntBASIC12.19□□□□□ -0.46
CCL1P22362 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.19□□□□□ -0.46
CCL1P22362 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL1P22362 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL1P22362 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL1P22362 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL1P22362 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL1P22362 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCL1P22362 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL1P22362 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.18□□□□□ -0.46
CCL1P22362 AC119751.2-201ENST00000504529 210 ntBASIC12.18□□□□□ -0.46
CCL1P22362 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL1P22362 RNA5SP412-201ENST00000516234 123 ntBASIC12.18□□□□□ -0.46
CCL1P22362 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL1P22362 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL1P22362 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL1P22362 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 SNORD3B-2-202ENST00000571722 791 ntBASIC12.18□□□□□ -0.46
CCL1P22362 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.18□□□□□ -0.46
CCL1P22362 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 LINC02084-201ENST00000606069 1096 ntBASIC12.18□□□□□ -0.46
CCL1P22362 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL1P22362 AL096828.3-201ENST00000615354 462 ntBASIC12.18□□□□□ -0.46
CCL1P22362 AC004923.1-202ENST00000642106 209 ntBASIC12.18□□□□□ -0.46
CCL1P22362 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL1P22362 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 BRD7P5-201ENST00000299197 1822 ntBASIC12.18□□□□□ -0.46
CCL1P22362 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 AC026271.4-201ENST00000578214 1833 ntBASIC12.18□□□□□ -0.46
CCL1P22362 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 POM121L14P-201ENST00000406100 1558 ntBASIC12.18□□□□□ -0.46
CCL1P22362 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL1P22362 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
CCL1P22362 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms