Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CDH3P22223 ACTG1P2-201ENST00000415776 1125 ntBASIC14.03□□□□□ -0.16
CDH3P22223 ACTG1P11-201ENST00000425411 1125 ntBASIC14.03□□□□□ -0.16
CDH3P22223 AL133466.1-201ENST00000447582 150 ntBASIC14.03□□□□□ -0.16
CDH3P22223 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH3P22223 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH3P22223 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH3P22223 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH3P22223 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH3P22223 AC027237.1-201ENST00000560942 655 ntBASIC14.03□□□□□ -0.16
CDH3P22223 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH3P22223 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH3P22223 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.03□□□□□ -0.16
CDH3P22223 AL021578.1-201ENST00000613646 709 ntBASIC14.03□□□□□ -0.16
CDH3P22223 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.03□□□□□ -0.16
CDH3P22223 CU633904.3-201ENST00000624042 1029 ntBASIC14.03□□□□□ -0.16
CDH3P22223 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
CDH3P22223 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH3P22223 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDH3P22223 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 AC131902.2-201ENST00000566892 2172 ntBASIC14.03□□□□□ -0.16
CDH3P22223 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH3P22223 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDH3P22223 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.02□□□□□ -0.16
CDH3P22223 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CDH3P22223 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CDH3P22223 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
CDH3P22223 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.02□□□□□ -0.16
CDH3P22223 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CDH3P22223 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.02□□□□□ -0.16
CDH3P22223 AC152010.1-201ENST00000415779 2006 ntBASIC14.02□□□□□ -0.16
CDH3P22223 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.02□□□□□ -0.16
CDH3P22223 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDH3P22223 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.02□□□□□ -0.16
CDH3P22223 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.02□□□□□ -0.16
CDH3P22223 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH3P22223 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CDH3P22223 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH3P22223 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH3P22223 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH3P22223 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CDH3P22223 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH3P22223 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH3P22223 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CDH3P22223 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CDH3P22223 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDH3P22223 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDH3P22223 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH3P22223 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDH3P22223 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH3P22223 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH3P22223 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDH3P22223 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms