Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VCLP18206 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VCLP18206 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
VCLP18206 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.37□□□□□ -0.11
VCLP18206 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VCLP18206 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.37□□□□□ -0.11
VCLP18206 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VCLP18206 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VCLP18206 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
VCLP18206 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VCLP18206 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VCLP18206 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.36□□□□□ -0.11
VCLP18206 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
VCLP18206 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VCLP18206 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
VCLP18206 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 DPM3-202ENST00000368399 517 ntBASIC14.36□□□□□ -0.11
VCLP18206 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.36□□□□□ -0.11
VCLP18206 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.36□□□□□ -0.11
VCLP18206 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.36□□□□□ -0.11
VCLP18206 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.36□□□□□ -0.11
VCLP18206 AC044849.1-201ENST00000519737 1188 ntBASIC14.36□□□□□ -0.11
VCLP18206 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.36□□□□□ -0.11
VCLP18206 MIR3615-201ENST00000581999 87 ntBASIC14.36□□□□□ -0.11
VCLP18206 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.36□□□□□ -0.11
VCLP18206 AC068587.8-201ENST00000641239 219 ntBASIC14.36□□□□□ -0.11
VCLP18206 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.36□□□□□ -0.11
VCLP18206 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.36□□□□□ -0.11
VCLP18206 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VCLP18206 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.36□□□□□ -0.11
VCLP18206 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VCLP18206 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 AC023794.5-201ENST00000564380 2157 ntBASIC14.36□□□□□ -0.11
VCLP18206 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VCLP18206 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.36□□□□□ -0.11
VCLP18206 FAM90A12P-201ENST00000519497 2375 ntBASIC14.36□□□□□ -0.11
VCLP18206 FAM90A24P-201ENST00000520792 2369 ntBASIC14.36□□□□□ -0.11
VCLP18206 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VCLP18206 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.35□□□□□ -0.11
VCLP18206 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 KLF2P1-201ENST00000447438 1042 ntBASIC14.35□□□□□ -0.11
VCLP18206 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.35□□□□□ -0.11
VCLP18206 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.35□□□□□ -0.11
VCLP18206 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 AL451050.2-201ENST00000606967 682 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms