Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRAFP15056 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.68□□□□□ -0.06
BRAFP15056 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 AC092658.1-201ENST00000505836 891 ntBASIC14.68□□□□□ -0.06
BRAFP15056 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.68□□□□□ -0.06
BRAFP15056 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.68□□□□□ -0.06
BRAFP15056 AP006547.1-201ENST00000563435 692 ntBASIC14.68□□□□□ -0.06
BRAFP15056 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.68□□□□□ -0.06
BRAFP15056 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 RN7SL560P-201ENST00000577943 264 ntBASIC14.68□□□□□ -0.06
BRAFP15056 RN7SL713P-201ENST00000582127 302 ntBASIC14.68□□□□□ -0.06
BRAFP15056 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.68□□□□□ -0.06
BRAFP15056 AP001002.3-201ENST00000623482 206 ntBASIC14.68□□□□□ -0.06
BRAFP15056 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.68□□□□□ -0.06
BRAFP15056 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
BRAFP15056 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
BRAFP15056 AL139385.1-201ENST00000611744 3272 ntBASIC14.68□□□□□ -0.06
BRAFP15056 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 AL022313.4-201ENST00000562756 2046 ntBASIC14.68□□□□□ -0.06
BRAFP15056 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.68□□□□□ -0.06
BRAFP15056 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
BRAFP15056 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
BRAFP15056 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRAFP15056 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BRAFP15056 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
BRAFP15056 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
BRAFP15056 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.67□□□□□ -0.06
BRAFP15056 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.67□□□□□ -0.06
BRAFP15056 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
BRAFP15056 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
BRAFP15056 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.67□□□□□ -0.06
BRAFP15056 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
BRAFP15056 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 FAM86MP-201ENST00000340703 885 ntBASIC14.67□□□□□ -0.06
BRAFP15056 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 ACTBP11-201ENST00000436287 1126 ntBASIC14.67□□□□□ -0.06
BRAFP15056 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
BRAFP15056 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 FAM86HP-204ENST00000513466 959 ntBASIC14.67□□□□□ -0.06
BRAFP15056 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.67□□□□□ -0.06
BRAFP15056 MIR6799-201ENST00000620297 69 ntBASIC14.67□□□□□ -0.06
BRAFP15056 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.67□□□□□ -0.06
BRAFP15056 AL928654.5-201ENST00000624831 2501 ntBASIC14.67□□□□□ -0.06
BRAFP15056 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.67□□□□□ -0.06
BRAFP15056 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.67□□□□□ -0.06
BRAFP15056 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.67□□□□□ -0.06
BRAFP15056 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRAFP15056 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms