Protein–RNA interactions for Protein: P10072

HKR1, Krueppel-related zinc finger protein 1, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1P10072 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HKR1P10072 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 AC215219.1-201ENST00000400706 1817 ntBASIC12.14□□□□□ -0.47
HKR1P10072 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
HKR1P10072 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HKR1P10072 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.14□□□□□ -0.47
HKR1P10072 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.14□□□□□ -0.47
HKR1P10072 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.14□□□□□ -0.47
HKR1P10072 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.14□□□□□ -0.47
HKR1P10072 AL008707.1-201ENST00000422498 534 ntBASIC12.14□□□□□ -0.47
HKR1P10072 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 AL133466.1-201ENST00000447582 150 ntBASIC12.14□□□□□ -0.47
HKR1P10072 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.14□□□□□ -0.47
HKR1P10072 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.14□□□□□ -0.47
HKR1P10072 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.14□□□□□ -0.47
HKR1P10072 COX5BP1-201ENST00000507622 393 ntBASIC12.14□□□□□ -0.47
HKR1P10072 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
HKR1P10072 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.14□□□□□ -0.47
HKR1P10072 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.14□□□□□ -0.47
HKR1P10072 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 AC007663.3-201ENST00000609632 465 ntBASIC12.14□□□□□ -0.47
HKR1P10072 AC091812.3-201ENST00000621362 345 ntBASIC12.14□□□□□ -0.47
HKR1P10072 CU633904.3-201ENST00000624042 1029 ntBASIC12.14□□□□□ -0.47
HKR1P10072 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.14□□□□□ -0.47
HKR1P10072 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.14□□□□□ -0.47
HKR1P10072 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.14□□□□□ -0.47
HKR1P10072 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HKR1P10072 HSPA8P5-201ENST00000456928 2069 ntBASIC12.14□□□□□ -0.47
HKR1P10072 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
HKR1P10072 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HKR1P10072 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HKR1P10072 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 MYADML-201ENST00000474610 2147 ntBASIC12.13□□□□□ -0.47
HKR1P10072 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.13□□□□□ -0.47
HKR1P10072 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.13□□□□□ -0.47
HKR1P10072 LRRC59-203ENST00000576448 1531 ntBASIC12.13□□□□□ -0.47
HKR1P10072 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.13□□□□□ -0.47
HKR1P10072 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.13□□□□□ -0.47
HKR1P10072 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.13□□□□□ -0.47
HKR1P10072 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HKR1P10072 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.13□□□□□ -0.47
HKR1P10072 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.13□□□□□ -0.47
HKR1P10072 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.13□□□□□ -0.47
HKR1P10072 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.13□□□□□ -0.47
HKR1P10072 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 AC245884.6-201ENST00000515672 1067 ntBASIC12.13□□□□□ -0.47
HKR1P10072 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.13□□□□□ -0.47
HKR1P10072 CHMP4BP1-201ENST00000556017 588 ntBASIC12.13□□□□□ -0.47
HKR1P10072 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HKR1P10072 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms