Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 AL591846.1-201ENST00000451736 433 ntBASIC14.28□□□□□ -0.12
APOA4P06727 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.28□□□□□ -0.12
APOA4P06727 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA4P06727 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.28□□□□□ -0.12
APOA4P06727 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.28□□□□□ -0.12
APOA4P06727 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA4P06727 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.28□□□□□ -0.12
APOA4P06727 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOA4P06727 AC007663.3-201ENST00000609632 465 ntBASIC14.28□□□□□ -0.12
APOA4P06727 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
APOA4P06727 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.28□□□□□ -0.12
APOA4P06727 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.28□□□□□ -0.12
APOA4P06727 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
APOA4P06727 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA4P06727 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
APOA4P06727 DGCR9-201ENST00000609630 2415 ntBASIC14.27□□□□□ -0.12
APOA4P06727 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.27□□□□□ -0.12
APOA4P06727 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
APOA4P06727 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
APOA4P06727 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 AC144522.1-201ENST00000625111 1658 ntBASIC14.27□□□□□ -0.12
APOA4P06727 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.27□□□□□ -0.12
APOA4P06727 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.27□□□□□ -0.12
APOA4P06727 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA4P06727 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
APOA4P06727 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
APOA4P06727 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA4P06727 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
APOA4P06727 RNMTL1P1-201ENST00000454103 560 ntBASIC14.27□□□□□ -0.13
APOA4P06727 PFN1P12-201ENST00000455938 534 ntBASIC14.27□□□□□ -0.13
APOA4P06727 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.27□□□□□ -0.13
APOA4P06727 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.27□□□□□ -0.13
APOA4P06727 AL160314.3-201ENST00000556041 767 ntBASIC14.27□□□□□ -0.13
APOA4P06727 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA4P06727 AC008805.1-201ENST00000590892 364 ntBASIC14.27□□□□□ -0.13
APOA4P06727 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.27□□□□□ -0.13
APOA4P06727 AC021016.3-201ENST00000608367 477 ntBASIC14.27□□□□□ -0.13
APOA4P06727 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 AC005695.3-201ENST00000614522 232 ntBASIC14.27□□□□□ -0.13
APOA4P06727 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.27□□□□□ -0.13
APOA4P06727 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.27□□□□□ -0.13
APOA4P06727 AC133540.1-201ENST00000620845 1019 ntBASIC14.27□□□□□ -0.13
APOA4P06727 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA4P06727 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.27□□□□□ -0.13
APOA4P06727 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.27□□□□□ -0.13
APOA4P06727 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA4P06727 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
APOA4P06727 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.27□□□□□ -0.13
APOA4P06727 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA4P06727 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.26□□□□□ -0.13
APOA4P06727 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOA4P06727 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.26□□□□□ -0.13
APOA4P06727 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.26□□□□□ -0.13
APOA4P06727 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 REXO1L6P-201ENST00000603433 1515 ntBASIC14.26□□□□□ -0.13
APOA4P06727 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 AC099521.3-201ENST00000624251 2938 ntBASIC14.26□□□□□ -0.13
APOA4P06727 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
APOA4P06727 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOA4P06727 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.26□□□□□ -0.13
APOA4P06727 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA4P06727 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms