Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.83□□□□□ -0.03
RB1P06400 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RB1P06400 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RB1P06400 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RB1P06400 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RB1P06400 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RB1P06400 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RB1P06400 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RB1P06400 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.83□□□□□ -0.03
RB1P06400 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RB1P06400 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 U3.5-201ENST00000363448 216 ntBASIC14.83□□□□□ -0.04
RB1P06400 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC14.83□□□□□ -0.04
RB1P06400 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.83□□□□□ -0.04
RB1P06400 KRT8P30-201ENST00000432100 650 ntBASIC14.83□□□□□ -0.04
RB1P06400 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.83□□□□□ -0.04
RB1P06400 GULOP-201ENST00000454030 748 ntBASIC14.83□□□□□ -0.04
RB1P06400 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.83□□□□□ -0.04
RB1P06400 IGHEP1-201ENST00000521393 651 ntBASIC14.83□□□□□ -0.04
RB1P06400 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 AL359219.1-201ENST00000556311 934 ntBASIC14.83□□□□□ -0.04
RB1P06400 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.83□□□□□ -0.04
RB1P06400 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 MIR8071-1-201ENST00000616769 65 ntBASIC14.83□□□□□ -0.04
RB1P06400 MIR8071-2-201ENST00000616772 65 ntBASIC14.83□□□□□ -0.04
RB1P06400 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RB1P06400 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RB1P06400 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RB1P06400 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC14.83□□□□□ -0.04
RB1P06400 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.83□□□□□ -0.04
RB1P06400 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.83□□□□□ -0.04
RB1P06400 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.83□□□□□ -0.04
RB1P06400 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RB1P06400 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.82□□□□□ -0.04
RB1P06400 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RB1P06400 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RB1P06400 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RB1P06400 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 AJ011931.1-201ENST00000618749 2492 ntBASIC14.82□□□□□ -0.04
RB1P06400 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RB1P06400 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 IFNWP2-201ENST00000431203 580 ntBASIC14.82□□□□□ -0.04
RB1P06400 AC015818.1-201ENST00000451011 244 ntBASIC14.82□□□□□ -0.04
RB1P06400 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RB1P06400 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 MIR4254-201ENST00000581063 76 ntBASIC14.82□□□□□ -0.04
RB1P06400 AC004686.1-201ENST00000605113 538 ntBASIC14.82□□□□□ -0.04
RB1P06400 AC026336.4-201ENST00000624565 1050 ntBASIC14.82□□□□□ -0.04
RB1P06400 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.82□□□□□ -0.04
RB1P06400 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.82□□□□□ -0.04
RB1P06400 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.82□□□□□ -0.04
RB1P06400 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms