Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV3P03979 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRGV3P03979 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV3P03979 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TRGV3P03979 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.23□□□□□ -0.61
TRGV3P03979 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
TRGV3P03979 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV3P03979 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 AL805961.2-201ENST00000642139 4817 ntBASIC11.23□□□□□ -0.61
TRGV3P03979 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
TRGV3P03979 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV3P03979 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV3P03979 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV3P03979 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 AC090857.1-201ENST00000527400 390 ntBASIC11.23□□□□□ -0.61
TRGV3P03979 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV3P03979 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV3P03979 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV3P03979 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV3P03979 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV3P03979 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV3P03979 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 KC6-205ENST00000599934 556 ntTSL 4 BASIC11.23□□□□□ -0.61
TRGV3P03979 AC026740.1-201ENST00000607068 791 ntBASIC11.23□□□□□ -0.61
TRGV3P03979 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC11.23□□□□□ -0.61
TRGV3P03979 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 AC020907.1-201ENST00000616460 1350 ntBASIC11.23□□□□□ -0.61
TRGV3P03979 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TRGV3P03979 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TRGV3P03979 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
TRGV3P03979 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
TRGV3P03979 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV3P03979 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
TRGV3P03979 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV3P03979 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV3P03979 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV3P03979 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TRGV3P03979 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV3P03979 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
TRGV3P03979 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
TRGV3P03979 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
TRGV3P03979 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
TRGV3P03979 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
TRGV3P03979 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV3P03979 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV3P03979 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.22□□□□□ -0.61
TRGV3P03979 GPAA1P2-201ENST00000417923 928 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms