Protein–RNA interactions for Protein: Q9BZR9

TRIM8, Probable E3 ubiquitin-protein ligase TRIM8, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8Q9BZR9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AC006033.1-201ENST00000440505 426 ntBASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 RPL13AP20-201ENST00000459725 609 ntBASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AL391280.1-201ENST00000506969 1062 ntBASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AP001889.1-201ENST00000525414 633 ntBASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AC068587.3-201ENST00000526613 355 ntBASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 CLUHP6-201ENST00000580789 941 ntBASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AP005019.2-201ENST00000615104 511 ntBASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM8Q9BZR9 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 PTP4A1P2-201ENST00000546033 454 ntBASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 AL590440.2-201ENST00000641973 1595 ntBASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM8Q9BZR9 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM8Q9BZR9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRIM8Q9BZR9 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRIM8Q9BZR9 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM8Q9BZR9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms