Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB40CQ96S21 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RAB40CQ96S21 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RAB40CQ96S21 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB40CQ96S21 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.59□□□□□ -0.55
RAB40CQ96S21 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB40CQ96S21 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB40CQ96S21 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB40CQ96S21 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB40CQ96S21 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB40CQ96S21 MAPK10-262ENST00000641051 5738 ntBASIC11.59□□□□□ -0.55
RAB40CQ96S21 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB40CQ96S21 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AC115284.2-201ENST00000624646 2054 ntBASIC11.58□□□□□ -0.56
RAB40CQ96S21 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AL358781.1-202ENST00000321081 1360 ntBASIC11.58□□□□□ -0.56
RAB40CQ96S21 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 POM121L8P-201ENST00000417732 1281 ntBASIC11.58□□□□□ -0.56
RAB40CQ96S21 POM121L9P-203ENST00000441984 1285 ntBASIC11.58□□□□□ -0.56
RAB40CQ96S21 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.58□□□□□ -0.56
RAB40CQ96S21 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AC073957.3-201ENST00000609998 6758 ntBASIC11.58□□□□□ -0.56
RAB40CQ96S21 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AC060814.4-201ENST00000594169 2163 ntBASIC11.58□□□□□ -0.56
RAB40CQ96S21 AGGF1P10-201ENST00000635005 2191 ntBASIC11.58□□□□□ -0.56
RAB40CQ96S21 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB40CQ96S21 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB40CQ96S21 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms