Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
STAG1Q8WVM7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 SIGLEC22P-201ENST00000599104 714 ntBASIC16.63■□□□□ 0.25
STAG1Q8WVM7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 AC005632.3-201ENST00000605544 308 ntBASIC16.63■□□□□ 0.25
STAG1Q8WVM7 CR392039.2-201ENST00000623182 509 ntBASIC16.63■□□□□ 0.25
STAG1Q8WVM7 AL805961.1-201ENST00000642026 753 ntBASIC16.63■□□□□ 0.25
STAG1Q8WVM7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 AC008620.2-201ENST00000510294 1569 ntBASIC16.63■□□□□ 0.25
STAG1Q8WVM7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 AC041040.2-201ENST00000622926 2899 ntBASIC16.63■□□□□ 0.25
STAG1Q8WVM7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
STAG1Q8WVM7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AC006372.4-201ENST00000624122 1543 ntBASIC16.62■□□□□ 0.25
STAG1Q8WVM7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AL512306.1-201ENST00000432698 848 ntBASIC16.62■□□□□ 0.25
STAG1Q8WVM7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 RN7SL788P-201ENST00000460504 316 ntBASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AC130709.1-201ENST00000484779 1212 ntBASIC16.62■□□□□ 0.25
STAG1Q8WVM7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.62■□□□□ 0.25
STAG1Q8WVM7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms