Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 AP001582.1-201ENST00000525856 295 ntBASIC13.89□□□□□ -0.19
RNF217Q8TC41 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF217Q8TC41 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 KIF28P-202ENST00000504864 3064 ntBASIC13.89□□□□□ -0.19
RNF217Q8TC41 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF217Q8TC41 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 AC113367.3-201ENST00000508316 1912 ntBASIC13.88□□□□□ -0.19
RNF217Q8TC41 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 MEP1AP4-201ENST00000423244 1087 ntBASIC13.88□□□□□ -0.19
RNF217Q8TC41 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 RNA5SP421-201ENST00000516864 134 ntBASIC13.88□□□□□ -0.19
RNF217Q8TC41 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF217Q8TC41 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF217Q8TC41 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF217Q8TC41 DDX12P-201ENST00000432996 2947 ntBASIC13.87□□□□□ -0.19
RNF217Q8TC41 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF217Q8TC41 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF217Q8TC41 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF217Q8TC41 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms