Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 LINC01815-202ENST00000641468 1409 ntBASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 ISCA2P1-201ENST00000425548 448 ntBASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 AL596276.2-201ENST00000447525 331 ntBASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 AC024681.1-201ENST00000521917 487 ntBASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 MIR3619-201ENST00000579667 83 ntBASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 PPT1-213ENST00000641319 2388 ntBASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 AC068760.1-201ENST00000493579 1953 ntBASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMARCC2Q8TAQ2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AC245884.6-201ENST00000515672 1067 ntBASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AL161670.2-201ENST00000557650 1227 ntBASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 CR392039.2-201ENST00000623182 509 ntBASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms