Protein–RNA interactions for Protein: Q8NBF2

NHLRC2, NHL repeat-containing protein 2, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC2Q8NBF2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
NHLRC2Q8NBF2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 RNU1-114P-201ENST00000365297 166 ntBASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 AC026410.3-201ENST00000514280 936 ntBASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 AC131206.1-201ENST00000538078 1211 ntBASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 KRT18P28-201ENST00000453838 1332 ntBASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 AC139712.1-201ENST00000378256 1875 ntBASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NHLRC2Q8NBF2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NHLRC2Q8NBF2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms