Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 BX679664.3-201ENST00000414070 555 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 AL355334.1-201ENST00000417713 215 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 AC018638.5-201ENST00000450885 754 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 SCARNA12-201ENST00000459155 270 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 AC113935.1-201ENST00000471722 555 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 RN7SL564P-201ENST00000496309 250 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 RN7SL357P-201ENST00000581065 298 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 AC015802.1-201ENST00000588104 1449 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 RN7SL455P-201ENST00000580629 282 ntBASIC15.8■□□□□ 0.12
TRIM50Q86XT4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM50Q86XT4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms