Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 Z82170.1-201ENST00000625081 3192 ntBASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AC015909.3-201ENST00000572855 1794 ntBASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AC007952.5-201ENST00000572818 1486 ntBASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 KRT8P24-201ENST00000560290 1559 ntBASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RPS9P1-201ENST00000419943 583 ntBASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RN7SL530P-201ENST00000485097 298 ntBASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 MEG3_2.1-201ENST00000611456 105 ntBASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 FRMPD2B-201ENST00000431305 1347 ntBASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 BRD7P5-201ENST00000299197 1822 ntBASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 AC005562.1-201ENST00000583030 3219 ntBASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LYSMD3Q7Z3D4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 IGHJ2P-201ENST00000454480 60 ntBASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms