Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 AC005034.1-201ENST00000426657 489 ntBASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 AC016694.1-201ENST00000434179 700 ntBASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 ENPP7P14-201ENST00000621765 1040 ntBASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 AC126564.1-201ENST00000623628 2013 ntBASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 TMEM14DP-201ENST00000422205 345 ntBASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 FO681548.1-201ENST00000455617 1132 ntBASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 AC132938.4-201ENST00000623835 848 ntBASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms