Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 EEF1A1P37-201ENST00000522748 715 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 MIR4469-201ENST00000583919 79 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC008751.2-201ENST00000597885 980 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 NIFKP6-201ENST00000598115 845 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC025175.1-201ENST00000606482 759 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 AL354809.1-201ENST00000618106 716 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 SPDYE12P-201ENST00000618416 771 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 AL391597.1-201ENST00000618707 694 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC010809.3-201ENST00000621310 641 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 TEX41-255ENST00000626404 610 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
LINC01559Q495D7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01559Q495D7 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.06□□□□□ -0.64
LINC01559Q495D7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AC092053.3-201ENST00000641308 4975 ntBASIC11.05□□□□□ -0.64
LINC01559Q495D7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 PDCL3P7-201ENST00000392251 712 ntBASIC11.05□□□□□ -0.64
LINC01559Q495D7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 NUS1P3-201ENST00000423502 862 ntBASIC11.05□□□□□ -0.64
LINC01559Q495D7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AC114878.1-201ENST00000441166 358 ntBASIC11.05□□□□□ -0.64
LINC01559Q495D7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AC096992.1-201ENST00000459808 709 ntBASIC11.05□□□□□ -0.64
LINC01559Q495D7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01559Q495D7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01559Q495D7 AC125611.1-201ENST00000549563 229 ntBASIC11.05□□□□□ -0.64
LINC01559Q495D7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms