RNA–Protein interactions for RNA: ENST00000598115.1

NIFKP6-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 6, humanhuman

BASIC

Gene NIFKP6, Length 845 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP6-201ENST00000598115 AEBP2Q6ZN18 517 aaPredicted RBP29.88■■■□□ 2.37
NIFKP6-201ENST00000598115 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
NIFKP6-201ENST00000598115 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
NIFKP6-201ENST00000598115 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
NIFKP6-201ENST00000598115 FOXD1Q16676 465 aa23.59■■□□□ 1.37
NIFKP6-201ENST00000598115 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
NIFKP6-201ENST00000598115 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
NIFKP6-201ENST00000598115 ADRA2BP18089 450 aa22.38■■□□□ 1.17
NIFKP6-201ENST00000598115 PIAS4Q8N2W9 510 aaPredicted RBP22.08■■□□□ 1.13
NIFKP6-201ENST00000598115 MSH5O43196 834 aa21.81■■□□□ 1.08
NIFKP6-201ENST00000598115 POTEDQ86YR6 584 aa20.95■□□□□ 0.94
NIFKP6-201ENST00000598115 MAPK8IP2Q13387 824 aaPredicted RBP20.42■□□□□ 0.86
NIFKP6-201ENST00000598115 PPP4R3CPQ6ZMV5 832 aa20.4■□□□□ 0.86
NIFKP6-201ENST00000598115 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
NIFKP6-201ENST00000598115 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
NIFKP6-201ENST00000598115 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
NIFKP6-201ENST00000598115 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
NIFKP6-201ENST00000598115 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
NIFKP6-201ENST00000598115 RNF216Q9NWF9 866 aaPredicted RBP19.61■□□□□ 0.73
NIFKP6-201ENST00000598115 KCNA4P22459 653 aa19.59■□□□□ 0.73
NIFKP6-201ENST00000598115 NPM3O75607 178 aaKnown RBP19.51■□□□□ 0.71
NIFKP6-201ENST00000598115 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
NIFKP6-201ENST00000598115 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
NIFKP6-201ENST00000598115 RNF39Q9H2S5 420 aa18.72■□□□□ 0.59
NIFKP6-201ENST00000598115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.57
NIFKP6-201ENST00000598115 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
NIFKP6-201ENST00000598115 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
NIFKP6-201ENST00000598115 C1QBPQ07021 282 aaKnown RBP18.43■□□□□ 0.54
NIFKP6-201ENST00000598115 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
NIFKP6-201ENST00000598115 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
NIFKP6-201ENST00000598115 FOXD4L1Q9NU39 408 aa18.08■□□□□ 0.48
NIFKP6-201ENST00000598115 ZBTB22O15209 634 aa18.07■□□□□ 0.48
NIFKP6-201ENST00000598115 MYCNP04198 464 aaPredicted RBP17.99■□□□□ 0.47
NIFKP6-201ENST00000598115 SPINK5Q9NQ38 1064 aaPredicted RBP17.95■□□□□ 0.46
NIFKP6-201ENST00000598115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
NIFKP6-201ENST00000598115 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
NIFKP6-201ENST00000598115 SAMD1Q6SPF0 538 aaPredicted RBP17.87■□□□□ 0.45
NIFKP6-201ENST00000598115 CAPN15O75808 1086 aa17.8■□□□□ 0.44
NIFKP6-201ENST00000598115 APLP2Q06481 763 aa17.78■□□□□ 0.44
NIFKP6-201ENST00000598115 DSG3P32926 999 aa17.68■□□□□ 0.42
NIFKP6-201ENST00000598115 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
NIFKP6-201ENST00000598115 TRHP20396 242 aaPredicted RBP17.64■□□□□ 0.41
NIFKP6-201ENST00000598115 ZNF219Q9P2Y4 722 aaPredicted RBP17.64■□□□□ 0.41
NIFKP6-201ENST00000598115 ATF5Q9Y2D1 282 aaPredicted RBP17.62■□□□□ 0.41
NIFKP6-201ENST00000598115 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
NIFKP6-201ENST00000598115 ATXN8OSP0DMR3 200 aa17.5■□□□□ 0.39
NIFKP6-201ENST00000598115 ABCB7O75027 752 aa17.47■□□□□ 0.39
NIFKP6-201ENST00000598115 POLA2Q14181 598 aa17.33■□□□□ 0.36
NIFKP6-201ENST00000598115 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
NIFKP6-201ENST00000598115 MKRN4PQ13434 485 aaPredicted RBP16.85■□□□□ 0.29
NIFKP6-201ENST00000598115 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
NIFKP6-201ENST00000598115 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
NIFKP6-201ENST00000598115 FBLN2P98095 1184 aa16.75■□□□□ 0.27
NIFKP6-201ENST00000598115 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
NIFKP6-201ENST00000598115 SPDYE2BA6NHP3 402 aa16.53■□□□□ 0.24
NIFKP6-201ENST00000598115 SPDYE6P0CI01 402 aa16.53■□□□□ 0.24
NIFKP6-201ENST00000598115 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
NIFKP6-201ENST00000598115 SSUH2Q9Y2M2 353 aa16.44■□□□□ 0.22
NIFKP6-201ENST00000598115 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
NIFKP6-201ENST00000598115 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
NIFKP6-201ENST00000598115 POTEHQ6S545 545 aa16.37■□□□□ 0.21
NIFKP6-201ENST00000598115 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
NIFKP6-201ENST00000598115 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
NIFKP6-201ENST00000598115 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
NIFKP6-201ENST00000598115 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
NIFKP6-201ENST00000598115 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
NIFKP6-201ENST00000598115 PROM2Q8N271 834 aa16.02■□□□□ 0.16
NIFKP6-201ENST00000598115 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
NIFKP6-201ENST00000598115 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
NIFKP6-201ENST00000598115 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
NIFKP6-201ENST00000598115 FKBP8Q14318 412 aa15.89■□□□□ 0.13
NIFKP6-201ENST00000598115 PRR29P0C7W0 189 aa15.82■□□□□ 0.12
NIFKP6-201ENST00000598115 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
NIFKP6-201ENST00000598115 PRKAR2AP13861 404 aaKnown RBP15.77■□□□□ 0.12
NIFKP6-201ENST00000598115 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
NIFKP6-201ENST00000598115 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
NIFKP6-201ENST00000598115 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
NIFKP6-201ENST00000598115 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
NIFKP6-201ENST00000598115 HAX1O00165 279 aa15.49■□□□□ 0.07
NIFKP6-201ENST00000598115 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
NIFKP6-201ENST00000598115 EVX2Q03828 476 aa15.48■□□□□ 0.07
NIFKP6-201ENST00000598115 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
NIFKP6-201ENST00000598115 MIER1Q8N108 512 aa15.35■□□□□ 0.05
NIFKP6-201ENST00000598115 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
NIFKP6-201ENST00000598115 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
NIFKP6-201ENST00000598115 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.04
NIFKP6-201ENST00000598115 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
NIFKP6-201ENST00000598115 VASPP50552 380 aaPredicted RBP15.25■□□□□ 0.03
NIFKP6-201ENST00000598115 PLEKHG5O94827 1062 aa15.21■□□□□ 0.03
NIFKP6-201ENST00000598115 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
NIFKP6-201ENST00000598115 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
NIFKP6-201ENST00000598115 ZBTB47Q9UFB7 747 aaPredicted RBP15.13■□□□□ 0.01
NIFKP6-201ENST00000598115 NUBP1P53384 320 aa15.11■□□□□ 0.01
NIFKP6-201ENST00000598115 RASEFQ8IZ41 740 aa15.11■□□□□ 0.01
NIFKP6-201ENST00000598115 GABBR2O75899 941 aa15.09■□□□□ 0.01
NIFKP6-201ENST00000598115 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
NIFKP6-201ENST00000598115 IFNLR1Q8IU57 520 aaPredicted RBP15.05■□□□□ -0
NIFKP6-201ENST00000598115 PHF12Q96QT6 1004 aa15.02■□□□□ -0
NIFKP6-201ENST00000598115 TSPYL2Q9H2G4 693 aaPredicted RBP15.02■□□□□ -0
NIFKP6-201ENST00000598115 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms