Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 AC018638.5-201ENST00000450885 754 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 PIN4P1-201ENST00000451079 396 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 DPY19L2P5-201ENST00000456300 331 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 KLF17P1-201ENST00000547105 1126 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 AC068867.1-201ENST00000559855 150 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 MIR6756-201ENST00000616240 63 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 HLA-C-210ENST00000640219 976 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 KRT8P18-201ENST00000413425 1445 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 AL359845.1-201ENST00000458202 1648 ntBASIC16.97■□□□□ 0.31
RFX7Q2KHR2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX7Q2KHR2 AC009474.1-201ENST00000455096 1565 ntBASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AL591122.2-201ENST00000624125 1853 ntBASIC16.96■□□□□ 0.31
RFX7Q2KHR2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 Z69890.1-201ENST00000382990 339 ntBASIC16.96■□□□□ 0.31
RFX7Q2KHR2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AC127024.7-201ENST00000625101 200 ntBASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.96■□□□□ 0.31
RFX7Q2KHR2 AC130686.1-201ENST00000622936 2466 ntBASIC16.96■□□□□ 0.31
RFX7Q2KHR2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX7Q2KHR2 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RFX7Q2KHR2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX7Q2KHR2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX7Q2KHR2 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX7Q2KHR2 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX7Q2KHR2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms