Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.98□□□□□ -0.33
CXCR4P61073 AL162726.2-201ENST00000438986 1017 ntBASIC12.98□□□□□ -0.33
CXCR4P61073 AC093433.1-201ENST00000458048 571 ntBASIC12.98□□□□□ -0.33
CXCR4P61073 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CXCR4P61073 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.98□□□□□ -0.33
CXCR4P61073 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.98□□□□□ -0.33
CXCR4P61073 CU634019.7-201ENST00000624153 1185 ntBASIC12.98□□□□□ -0.33
CXCR4P61073 FP236241.2-201ENST00000624906 1185 ntBASIC12.98□□□□□ -0.33
CXCR4P61073 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCR4P61073 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCR4P61073 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
CXCR4P61073 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 AC007541.1-201ENST00000570282 1469 ntBASIC12.97□□□□□ -0.33
CXCR4P61073 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 AC087499.6-201ENST00000411576 835 ntBASIC12.97□□□□□ -0.33
CXCR4P61073 POM121L8P-201ENST00000417732 1281 ntBASIC12.97□□□□□ -0.33
CXCR4P61073 POM121L9P-203ENST00000441984 1285 ntBASIC12.97□□□□□ -0.33
CXCR4P61073 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CXCR4P61073 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.97□□□□□ -0.33
CXCR4P61073 CHCHD2P3-201ENST00000603038 451 ntBASIC12.97□□□□□ -0.33
CXCR4P61073 AC138466.3-201ENST00000619983 221 ntBASIC12.97□□□□□ -0.33
CXCR4P61073 AC139530.3-201ENST00000620344 690 ntBASIC12.97□□□□□ -0.33
CXCR4P61073 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCR4P61073 AC073869.1-201ENST00000415574 2762 ntBASIC12.97□□□□□ -0.33
CXCR4P61073 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCR4P61073 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCR4P61073 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CXCR4P61073 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.96□□□□□ -0.33
CXCR4P61073 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.96□□□□□ -0.33
CXCR4P61073 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CXCR4P61073 AP001972.5-201ENST00000624624 2338 ntBASIC12.96□□□□□ -0.33
CXCR4P61073 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CXCR4P61073 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.96□□□□□ -0.33
CXCR4P61073 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 TNRC18P1-201ENST00000502875 3650 ntBASIC12.96□□□□□ -0.33
CXCR4P61073 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
CXCR4P61073 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.96□□□□□ -0.33
CXCR4P61073 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.96□□□□□ -0.33
CXCR4P61073 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CXCR4P61073 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms