Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GRIA4P48058 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
GRIA4P48058 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 AC005252.3-201ENST00000623855 2258 ntBASIC14.59□□□□□ -0.07
GRIA4P48058 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
GRIA4P48058 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.59□□□□□ -0.07
GRIA4P48058 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 KRT18P36-201ENST00000411618 1276 ntBASIC14.59□□□□□ -0.07
GRIA4P48058 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.59□□□□□ -0.07
GRIA4P48058 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.59□□□□□ -0.07
GRIA4P48058 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
GRIA4P48058 AC003686.1-201ENST00000550956 1034 ntBASIC14.59□□□□□ -0.07
GRIA4P48058 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.59□□□□□ -0.07
GRIA4P48058 AC124068.2-201ENST00000569473 1109 ntBASIC14.59□□□□□ -0.07
GRIA4P48058 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 MIR3147-201ENST00000577811 66 ntBASIC14.59□□□□□ -0.07
GRIA4P48058 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.59□□□□□ -0.07
GRIA4P48058 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GRIA4P48058 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 AL137784.3-201ENST00000623858 2288 ntBASIC14.59□□□□□ -0.07
GRIA4P48058 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GRIA4P48058 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GRIA4P48058 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.58□□□□□ -0.07
GRIA4P48058 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
GRIA4P48058 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
GRIA4P48058 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
GRIA4P48058 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
GRIA4P48058 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
GRIA4P48058 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
GRIA4P48058 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GRIA4P48058 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.58□□□□□ -0.08
GRIA4P48058 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.58□□□□□ -0.08
GRIA4P48058 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.58□□□□□ -0.08
GRIA4P48058 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
GRIA4P48058 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.58□□□□□ -0.08
GRIA4P48058 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
GRIA4P48058 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.58□□□□□ -0.08
GRIA4P48058 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.58□□□□□ -0.08
GRIA4P48058 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.58□□□□□ -0.08
GRIA4P48058 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.58□□□□□ -0.08
GRIA4P48058 AC098935.1-201ENST00000446057 611 ntBASIC14.58□□□□□ -0.08
GRIA4P48058 FGFR3P1-201ENST00000449999 601 ntBASIC14.58□□□□□ -0.08
GRIA4P48058 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.58□□□□□ -0.08
GRIA4P48058 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.58□□□□□ -0.08
GRIA4P48058 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.58□□□□□ -0.08
GRIA4P48058 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.58□□□□□ -0.08
GRIA4P48058 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.58□□□□□ -0.08
GRIA4P48058 AC021016.3-201ENST00000608367 477 ntBASIC14.58□□□□□ -0.08
GRIA4P48058 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.58□□□□□ -0.08
GRIA4P48058 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GRIA4P48058 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms