Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.03■□□□□ -0
BRCC3P46736 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
BRCC3P46736 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.03■□□□□ -0
BRCC3P46736 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.03■□□□□ -0
BRCC3P46736 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.03■□□□□ -0
BRCC3P46736 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.03■□□□□ -0
BRCC3P46736 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.03■□□□□ -0
BRCC3P46736 AL357563.1-201ENST00000404728 395 ntBASIC15.03■□□□□ -0
BRCC3P46736 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.03■□□□□ -0
BRCC3P46736 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.03■□□□□ -0
BRCC3P46736 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.03■□□□□ -0
BRCC3P46736 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.03■□□□□ -0
BRCC3P46736 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 AP005264.5-201ENST00000590066 467 ntBASIC15.03■□□□□ -0
BRCC3P46736 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.03■□□□□ -0
BRCC3P46736 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.03■□□□□ -0
BRCC3P46736 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.03■□□□□ -0
BRCC3P46736 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
BRCC3P46736 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.03■□□□□ -0
BRCC3P46736 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.03■□□□□ -0
BRCC3P46736 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
BRCC3P46736 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
BRCC3P46736 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.03■□□□□ -0
BRCC3P46736 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BRCC3P46736 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BRCC3P46736 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
BRCC3P46736 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.02■□□□□ -0
BRCC3P46736 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
BRCC3P46736 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.02■□□□□ -0
BRCC3P46736 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.02■□□□□ -0
BRCC3P46736 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.02■□□□□ -0
BRCC3P46736 AC092573.1-201ENST00000433054 884 ntBASIC15.02■□□□□ -0
BRCC3P46736 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.02■□□□□ -0
BRCC3P46736 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.02■□□□□ -0
BRCC3P46736 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.02■□□□□ -0
BRCC3P46736 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRCC3P46736 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.02■□□□□ -0
BRCC3P46736 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.02■□□□□ -0
BRCC3P46736 AL031673.1-201ENST00000611460 466 ntBASIC15.02■□□□□ -0
BRCC3P46736 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.02■□□□□ -0
BRCC3P46736 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRCC3P46736 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRCC3P46736 AC097376.2-205ENST00000610159 5334 ntBASIC15.02□□□□□ -0.01
BRCC3P46736 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRCC3P46736 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
BRCC3P46736 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.02□□□□□ -0.01
BRCC3P46736 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCC3P46736 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
BRCC3P46736 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCC3P46736 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCC3P46736 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCC3P46736 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
BRCC3P46736 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 RNVU1-8-201ENST00000364272 125 ntBASIC15.01□□□□□ -0.01
BRCC3P46736 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 RPL3P2-204ENST00000413027 1203 ntBASIC15.01□□□□□ -0.01
BRCC3P46736 OR52M2P-201ENST00000414298 959 ntBASIC15.01□□□□□ -0.01
BRCC3P46736 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCC3P46736 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCC3P46736 STK24P1-201ENST00000455035 1291 ntBASIC15.01□□□□□ -0.01
BRCC3P46736 RN7SL375P-201ENST00000492442 298 ntBASIC15.01□□□□□ -0.01
BRCC3P46736 RN7SL767P-201ENST00000493013 295 ntBASIC15.01□□□□□ -0.01
BRCC3P46736 LINC00634-202ENST00000505157 222 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms