Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PTPN3P26045 RNA5SP359-201ENST00000364838 113 ntBASIC14.47□□□□□ -0.09
PTPN3P26045 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 RPS9P1-201ENST00000419943 583 ntBASIC14.47□□□□□ -0.09
PTPN3P26045 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.47□□□□□ -0.09
PTPN3P26045 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.47□□□□□ -0.09
PTPN3P26045 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.47□□□□□ -0.09
PTPN3P26045 RN7SL219P-201ENST00000582872 296 ntBASIC14.47□□□□□ -0.09
PTPN3P26045 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 AL022328.3-201ENST00000607943 679 ntBASIC14.47□□□□□ -0.09
PTPN3P26045 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.47□□□□□ -0.09
PTPN3P26045 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 AC073869.1-201ENST00000415574 2762 ntBASIC14.46□□□□□ -0.09
PTPN3P26045 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.46□□□□□ -0.09
PTPN3P26045 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 RN7SKP214-201ENST00000364208 315 ntBASIC14.46□□□□□ -0.09
PTPN3P26045 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PTPN3P26045 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.46□□□□□ -0.09
PTPN3P26045 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.46□□□□□ -0.09
PTPN3P26045 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 AC006033.1-201ENST00000440505 426 ntBASIC14.46□□□□□ -0.09
PTPN3P26045 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.46□□□□□ -0.09
PTPN3P26045 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.46□□□□□ -0.09
PTPN3P26045 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.46□□□□□ -0.09
PTPN3P26045 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.46□□□□□ -0.09
PTPN3P26045 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PTPN3P26045 AC026740.1-201ENST00000607068 791 ntBASIC14.46□□□□□ -0.09
PTPN3P26045 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.46□□□□□ -0.09
PTPN3P26045 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.46□□□□□ -0.09
PTPN3P26045 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTPN3P26045 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.46□□□□□ -0.09
PTPN3P26045 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.46□□□□□ -0.09
PTPN3P26045 AL139158.3-201ENST00000641212 1562 ntBASIC14.46□□□□□ -0.09
PTPN3P26045 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PTPN3P26045 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms