Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATF1P18846 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ATF1P18846 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.52□□□□□ -0.4
ATF1P18846 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ATF1P18846 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATF1P18846 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATF1P18846 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 AC092933.1-201ENST00000393644 945 ntBASIC12.52□□□□□ -0.41
ATF1P18846 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.52□□□□□ -0.41
ATF1P18846 CD8B2-202ENST00000417670 633 ntBASIC12.52□□□□□ -0.41
ATF1P18846 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 AC007389.4-201ENST00000454674 793 ntBASIC12.52□□□□□ -0.41
ATF1P18846 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 SLC25A47P1-201ENST00000531577 414 ntBASIC12.52□□□□□ -0.41
ATF1P18846 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.52□□□□□ -0.41
ATF1P18846 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.52□□□□□ -0.41
ATF1P18846 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ATF1P18846 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.52□□□□□ -0.41
ATF1P18846 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.52□□□□□ -0.41
ATF1P18846 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.52□□□□□ -0.41
ATF1P18846 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 AC010970.1-201ENST00000445125 1848 ntBASIC12.52□□□□□ -0.41
ATF1P18846 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.52□□□□□ -0.41
ATF1P18846 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.52□□□□□ -0.41
ATF1P18846 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 Z98257.2-202ENST00000641138 1548 ntBASIC12.52□□□□□ -0.41
ATF1P18846 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
ATF1P18846 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATF1P18846 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
ATF1P18846 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ATF1P18846 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.51□□□□□ -0.41
ATF1P18846 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.51□□□□□ -0.41
ATF1P18846 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
ATF1P18846 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.51□□□□□ -0.41
ATF1P18846 FAM197Y7-201ENST00000432892 766 ntBASIC12.51□□□□□ -0.41
ATF1P18846 BCRP2-202ENST00000447763 634 ntBASIC12.51□□□□□ -0.41
ATF1P18846 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.51□□□□□ -0.41
ATF1P18846 RN7SL837P-201ENST00000463010 287 ntBASIC12.51□□□□□ -0.41
ATF1P18846 RN7SL752P-201ENST00000463779 287 ntBASIC12.51□□□□□ -0.41
ATF1P18846 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 BCRP6-201ENST00000510112 632 ntBASIC12.51□□□□□ -0.41
ATF1P18846 BCRP7-201ENST00000511549 544 ntBASIC12.51□□□□□ -0.41
ATF1P18846 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.51□□□□□ -0.41
ATF1P18846 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.51□□□□□ -0.41
ATF1P18846 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 AC015936.2-201ENST00000593177 259 ntBASIC12.51□□□□□ -0.41
ATF1P18846 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.51□□□□□ -0.41
ATF1P18846 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.51□□□□□ -0.41
ATF1P18846 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.51□□□□□ -0.41
ATF1P18846 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms