Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.63□□□□□ -0.39
CTLA4P16410 AC022748.3-201ENST00000621828 275 ntBASIC12.63□□□□□ -0.39
CTLA4P16410 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CTLA4P16410 TCAF1P1-201ENST00000414990 2232 ntBASIC12.63□□□□□ -0.39
CTLA4P16410 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CTLA4P16410 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CTLA4P16410 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.63□□□□□ -0.39
CTLA4P16410 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CTLA4P16410 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.63□□□□□ -0.39
CTLA4P16410 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CTLA4P16410 AC068760.1-201ENST00000493579 1953 ntBASIC12.63□□□□□ -0.39
CTLA4P16410 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 AL137784.3-201ENST00000623858 2288 ntBASIC12.63□□□□□ -0.39
CTLA4P16410 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CTLA4P16410 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTLA4P16410 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CTLA4P16410 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CTLA4P16410 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CTLA4P16410 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CTLA4P16410 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CTLA4P16410 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.62□□□□□ -0.39
CTLA4P16410 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.62□□□□□ -0.39
CTLA4P16410 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CTLA4P16410 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 AC078875.1-201ENST00000431907 724 ntBASIC12.62□□□□□ -0.39
CTLA4P16410 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.62□□□□□ -0.39
CTLA4P16410 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CTLA4P16410 CR392039.2-201ENST00000623182 509 ntBASIC12.62□□□□□ -0.39
CTLA4P16410 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.62□□□□□ -0.39
CTLA4P16410 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 CICP8-201ENST00000455800 2813 ntBASIC12.62□□□□□ -0.39
CTLA4P16410 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CTLA4P16410 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.62□□□□□ -0.39
CTLA4P16410 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTLA4P16410 DMBT1P1-203ENST00000636837 4628 ntBASIC12.61□□□□□ -0.39
CTLA4P16410 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.61□□□□□ -0.39
CTLA4P16410 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTLA4P16410 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.61□□□□□ -0.39
CTLA4P16410 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTLA4P16410 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.61□□□□□ -0.39
CTLA4P16410 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTLA4P16410 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTLA4P16410 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTLA4P16410 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.61□□□□□ -0.39
CTLA4P16410 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms