Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SLC25A6P4-201ENST00000586535 553 ntBASIC12.73□□□□□ -0.37
APOA1P02647 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.73□□□□□ -0.37
APOA1P02647 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 AC105339.1-204ENST00000636249 355 ntBASIC12.73□□□□□ -0.37
APOA1P02647 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.73□□□□□ -0.37
APOA1P02647 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
APOA1P02647 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.73□□□□□ -0.37
APOA1P02647 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.73□□□□□ -0.37
APOA1P02647 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 AC015818.9-201ENST00000591705 4582 ntBASIC12.72□□□□□ -0.37
APOA1P02647 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOA1P02647 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOA1P02647 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.72□□□□□ -0.37
APOA1P02647 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC12.72□□□□□ -0.37
APOA1P02647 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.72□□□□□ -0.37
APOA1P02647 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.72□□□□□ -0.37
APOA1P02647 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.72□□□□□ -0.37
APOA1P02647 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.72□□□□□ -0.37
APOA1P02647 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.72□□□□□ -0.37
APOA1P02647 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.72□□□□□ -0.37
APOA1P02647 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 SORD2P-201ENST00000558556 1069 ntBASIC12.72□□□□□ -0.37
APOA1P02647 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
APOA1P02647 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 AC092028.1-202ENST00000641483 3547 ntBASIC12.72□□□□□ -0.37
APOA1P02647 AC092028.1-201ENST00000641781 3540 ntBASIC12.72□□□□□ -0.37
APOA1P02647 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.72□□□□□ -0.37
APOA1P02647 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOA1P02647 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.72□□□□□ -0.37
APOA1P02647 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.71□□□□□ -0.37
APOA1P02647 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOA1P02647 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.71□□□□□ -0.37
APOA1P02647 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOA1P02647 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.37
APOA1P02647 LINC01165-201ENST00000445190 1623 ntBASIC12.71□□□□□ -0.37
APOA1P02647 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
APOA1P02647 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOA1P02647 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms