Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SNORA50.1-201ENST00000628590 135 ntBASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 AL365181.1-201ENST00000564032 1828 ntBASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 AP000354.1-201ENST00000396982 456 ntBASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 FAM21EP-201ENST00000417804 985 ntBASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 KRT18P37-201ENST00000520711 1282 ntBASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 AC010976.2-201ENST00000609697 852 ntBASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 AC127024.7-201ENST00000625101 200 ntBASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 GUCY2EP-203ENST00000531117 1918 ntBASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 AL157996.1-201ENST00000624684 2299 ntBASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPO2Q9UMS6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AQP7P5-201ENST00000428759 1049 ntBASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AQP7P4-201ENST00000447083 1042 ntBASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AQP7P2-201ENST00000453967 1041 ntBASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 TRMT112P3-201ENST00000580149 358 ntBASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AC073592.2-201ENST00000623062 780 ntBASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AQP7P3-201ENST00000624547 1041 ntBASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SYNPO2Q9UMS6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms