Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 CAP2P1-201ENST00000557743 1390 ntBASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 AL627231.1-201ENST00000394467 1125 ntBASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 HINT2P1-201ENST00000419438 481 ntBASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 RPL8P2-201ENST00000430538 502 ntBASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 DUX4L50-201ENST00000455245 715 ntBASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 AL022334.2-201ENST00000610000 484 ntBASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP2Q9UDT6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CLIP2Q9UDT6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AC011498.7-201ENST00000624986 2027 ntBASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 AC090386.2-201ENST00000623010 1039 ntBASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CLIP2Q9UDT6 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 244.8 ms