Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MIR600HG-201ENST00000449175 5984 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 COL6A4P2-202ENST00000504443 2753 ntBASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 KHSRPP1-201ENST00000427983 1768 ntBASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 FTH1P22-201ENST00000456305 520 ntBASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 CHCHD2P9-201ENST00000461726 456 ntBASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC6Q9UBN7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 SBF1P1-201ENST00000444527 5631 ntBASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 AC015688.4-201ENST00000580780 1647 ntBASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 AC022447.6-201ENST00000515522 438 ntBASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 AC130686.1-201ENST00000622936 2466 ntBASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC6Q9UBN7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 AC016397.2-201ENST00000624848 1985 ntBASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC6Q9UBN7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms