Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MTND6P4-201ENST00000506002 522 ntBASIC12.8□□□□□ -0.36
CHD8Q9HCK8 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 AC103810.4-201ENST00000578601 257 ntBASIC12.8□□□□□ -0.36
CHD8Q9HCK8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 AC023024.2-201ENST00000623561 1993 ntBASIC12.8□□□□□ -0.36
CHD8Q9HCK8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 RN7SL111P-201ENST00000468841 285 ntBASIC12.79□□□□□ -0.36
CHD8Q9HCK8 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 AL512310.5-201ENST00000551999 515 ntBASIC12.79□□□□□ -0.36
CHD8Q9HCK8 RN7SL750P-201ENST00000582814 238 ntBASIC12.79□□□□□ -0.36
CHD8Q9HCK8 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 AC096919.1-201ENST00000472730 652 ntBASIC12.79□□□□□ -0.36
CHD8Q9HCK8 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.79□□□□□ -0.36
CHD8Q9HCK8 FURIN-208ENST00000640725 224 ntTSL 5 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
CHD8Q9HCK8 AL513477.1-201ENST00000602865 2407 ntBASIC12.79□□□□□ -0.36
CHD8Q9HCK8 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 MIR1307-201ENST00000408840 149 ntBASIC12.78□□□□□ -0.36
CHD8Q9HCK8 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 TCP10-205ENST00000476779 646 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 KRT18P8-201ENST00000581937 1246 ntBASIC12.78□□□□□ -0.36
CHD8Q9HCK8 GH2-205ENST00000622506 702 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms